Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DW990_18740 | Not Available | Positive | 4338268 - 4338645 | 14680.5 |
| mobilization protein | DW990_18745 | Not Available | Positive | 4338645 - 4339715 | 40380.2 |
| metalloproteinase | DW990_18750 | Not Available | Positive | 4339999 - 4340418 | 15696.9 |
| relaxase | DW990_18755 | Not Available | Positive | 4340415 - 4341623 | 46073.4 |
| hypothetical protein | DW990_18760 | Not Available | Positive | 4341640 - 4342167 | 19692.3 |
| hypothetical protein | DW990_18770 | Not Available | Negative | 4343287 - 4343925 | 24294.9 |
| atp-dependent helicase | DW990_18775 | Not Available | Negative | 4343991 - 4344962 | 37078.3 |
| dgqhr domain-containing protein | DW990_18780 | Not Available | Negative | 4344959 - 4347295 | 90360.8 |
| dam family site-specific dna-(adenine-n6)-methyltransferase | DW990_18785 | Not Available | Negative | 4347331 - 4348236 | 35006.0 |
| xre family transcriptional regulator | DW990_18790 | Not Available | Negative | 4348272 - 4348511 | 9250.06 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

