Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | DW990_18450 | Not Available | Positive | 4278686 - 4279600 | 32976.2 |
| beta-n-acetylhexosaminidase | DW990_18455 | Not Available | Positive | 4279646 - 4281967 | 87107.3 |
| rna-binding protein | DW990_18460 | Not Available | Negative | 4282151 - 4282396 | 9169.97 |
| cof-type had-iib family hydrolase | DW990_18470 | Not Available | Negative | 4283208 - 4284014 | 30316.9 |
| dna recombination protein rmuc | DW990_18475 | Not Available | Positive | 4284110 - 4285345 | 46960.8 |
| sensor protein kdpd | DW990_18490 | Not Available | Negative | 4287581 - 4288708 | 42585.0 |
| duf5131 family protein | DW990_18495 | Not Available | Negative | 4288888 - 4289655 | 29868.6 |
| nudix hydrolase | DW990_18500 | Not Available | Positive | 4289862 - 4290416 | 21466.5 |
| pyridoxamine 5'-phosphate oxidase | DW990_18505 | Not Available | Negative | 4290804 - 4291223 | 16248.4 |
| arac family transcriptional regulator | DW990_18510 | Not Available | Negative | 4291315 - 4292256 | 36805.5 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

