Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 4245236 - 4245319 | Not Available |
| duf3316 domain-containing protein | DW990_18310 | Not Available | Negative | 4246424 - 4247269 | 31970.1 |
| dna gyrase/topoisomerase iv subunit a | DW990_18315 | Not Available | Negative | 4247273 - 4249966 | 102634.0 |
| glycine--trna ligase | DW990_18320 | Not Available | Positive | 4250118 - 4251659 | 59436.0 |
| aspartate-semialdehyde dehydrogenase | DW990_18330 | Not Available | Negative | 4252789 - 4253799 | 37267.8 |
| trna threonylcarbamoyladenosine dehydratase | DW990_18340 | Not Available | Positive | 4256098 - 4256820 | 27062.2 |
| abc transporter atp-binding protein | DW990_18345 | Not Available | Positive | 4256823 - 4257482 | 23912.2 |
| hypothetical protein | DW990_18350 | Not Available | Negative | 4257494 - 4258447 | 35178.7 |
| iron-containing alcohol dehydrogenase | DW990_18355 | Not Available | Negative | 4258530 - 4259924 | 51621.1 |
| hypothetical protein | DW990_18365 | Not Available | Positive | 4260957 - 4261910 | 38522.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

