Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comf family protein | DW990_01760 | Not Available | Negative | 438554 - 439249 | 26096.9 |
| recx family transcriptional regulator | DW990_01765 | Not Available | Negative | 439230 - 439715 | 18855.8 |
| peptide chain release factor n(5)-glutamine methyltransferase | DW990_01770 | Not Available | Negative | 439717 - 440553 | 31853.4 |
| hypothetical protein | DW990_01780 | Not Available | Positive | 441777 - 443174 | 52280.1 |
| isoprenyl transferase | DW990_01785 | Not Available | Positive | 443208 - 443939 | 28066.4 |
| outer membrane protein assembly factor bama | DW990_01790 | Not Available | Positive | 443951 - 446593 | 100716.0 |
| omph family outer membrane protein | DW990_01795 | Not Available | Positive | 446614 - 447129 | 18937.6 |
| omph family outer membrane protein | DW990_01800 | Not Available | Positive | 447187 - 447690 | 19260.2 |
| glutamate racemase | DW990_01805 | Not Available | Positive | 447793 - 448638 | 31392.0 |
| pyridoxamine kinase | DW990_01810 | Not Available | Positive | 448695 - 449567 | 32693.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

