Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sorbitol dehydrogenase | DW990_18245 | Not Available | Negative | 4228210 - 4229229 | 36707.0 |
| l-fucose:h+ symporter permease | DW990_18250 | Not Available | Negative | 4229252 - 4230511 | 47261.1 |
| amidohydrolase | DW990_18255 | Not Available | Negative | 4230538 - 4231461 | 35521.1 |
| aldo/keto reductase | DW990_18260 | Not Available | Negative | 4231479 - 4232411 | 34845.4 |
| arac family transcriptional regulator | DW990_18265 | Not Available | Negative | 4232529 - 4233389 | 33597.6 |
| tonb-dependent receptor | DW990_18275 | Not Available | Positive | 4235364 - 4238435 | 113422.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_18280 | Not Available | Positive | 4238461 - 4240149 | 64006.0 |
| l-rhamnose mutarotase | DW990_18285 | Not Available | Positive | 4240172 - 4240555 | 15479.7 |
| glycoside hydrolase family 97 protein | DW990_18290 | Not Available | Positive | 4240627 - 4242510 | 71882.3 |
| duf5110 domain-containing protein | DW990_18295 | Not Available | Positive | 4242685 - 4245138 | 93567.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

