Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DW990_18075 | Not Available | Negative | 4193503 - 4195923 | 91817.4 |
| abc transporter atp-binding protein | DW990_18080 | Not Available | Negative | 4195923 - 4196633 | 26421.1 |
| efflux rnd transporter periplasmic adaptor subunit | DW990_18085 | Not Available | Negative | 4196647 - 4197897 | 47799.6 |
| tolc family protein | DW990_18090 | Not Available | Negative | 4197903 - 4199210 | 50677.0 |
| sigma-54-dependent fis family transcriptional regulator | DW990_18095 | Not Available | Positive | 4199542 - 4200873 | 50275.0 |
| pas domain-containing protein | DW990_18100 | Not Available | Positive | 4200879 - 4202201 | 50274.6 |
| gnat family n-acetyltransferase | DW990_18105 | Not Available | Negative | 4202328 - 4203860 | 59325.0 |
| glutamine synthetase | DW990_18110 | Not Available | Positive | 4204066 - 4205568 | 56007.0 |
| Trna-gly | Not Available | Not Available | Positive | 4205689 - 4205764 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4205777 - 4205860 | Not Available |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

