Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ndp-sugar synthase | DW990_17940 | Not Available | Negative | 4167156 - 4167866 | 26296.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DW990_17945 | Not Available | Negative | 4167908 - 4169008 | 40647.4 |
| duf4837 family protein | DW990_17950 | Not Available | Negative | 4169035 - 4170099 | 40620.1 |
| duf4922 domain-containing protein | DW990_17960 | Not Available | Positive | 4171260 - 4173731 | 94485.2 |
| mfs transporter | DW990_17970 | Not Available | Positive | 4175161 - 4176435 | 47728.5 |
| hypothetical protein | DW990_17980 | Not Available | Negative | 4176924 - 4177130 | 7932.03 |
| duf4251 domain-containing protein | DW990_17985 | Not Available | Positive | 4177295 - 4177849 | 20104.3 |
| duf4251 domain-containing protein | DW990_17990 | Not Available | Positive | 4178083 - 4178640 | 20164.2 |
| duf4136 domain-containing protein | DW990_17995 | Not Available | Positive | 4178666 - 4179298 | 24210.4 |
| dna-binding response regulator | DW990_18015 | Not Available | Positive | 4181101 - 4181886 | 30228.6 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

