Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3244 domain-containing protein | DW990_17525 | Not Available | Negative | 4084516 - 4084920 | 14848.9 |
| tetratricopeptide repeat protein | DW990_17530 | Not Available | Negative | 4085079 - 4086935 | 72895.5 |
| mate family efflux transporter | DW990_17540 | Not Available | Negative | 4087848 - 4089218 | 49490.1 |
| serine protease | DW990_17545 | Not Available | Positive | 4089340 - 4090713 | 49946.9 |
| exodeoxyribonuclease vii large subunit | DW990_17550 | Not Available | Positive | 4090713 - 4092020 | 49535.8 |
| exodeoxyribonuclease vii small subunit | DW990_17555 | Not Available | Positive | 4092029 - 4092232 | 7823.46 |
| duf975 family protein | DW990_17565 | Not Available | Positive | 4093449 - 4094075 | 23245.0 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DW990_17570 | Not Available | Positive | 4094198 - 4094956 | 29774.6 |
| mrp family atp-binding protein | DW990_17575 | Not Available | Positive | 4094967 - 4096067 | 39559.0 |
| tonb family protein | DW990_17580 | Not Available | Negative | 4096135 - 4097985 | 69479.5 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

