Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | DW990_17335 | Not Available | Positive | 4045130 - 4045729 | 22662.3 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | DW990_17340 | Not Available | Positive | 4045761 - 4046507 | 25964.4 |
| rna pseudouridine synthase | DW990_17345 | Not Available | Positive | 4046509 - 4047180 | 25519.9 |
| hypothetical protein | DW990_17350 | Not Available | Negative | 4047245 - 4047550 | 10798.8 |
| sigma-54-dependent fis family transcriptional regulator | DW990_17355 | Not Available | Negative | 4047835 - 4049217 | 51219.5 |
| response regulator | DW990_17360 | Not Available | Negative | 4049319 - 4051886 | 96914.3 |
| mate family efflux transporter | DW990_17365 | Not Available | Negative | 4051900 - 4053210 | 48579.2 |
| insulinase family protein | DW990_17370 | Not Available | Negative | 4053304 - 4054548 | 47349.5 |
| peptidylprolyl isomerase | DW990_17375 | Not Available | Negative | 4054561 - 4055406 | 31477.6 |
| hypothetical protein | DW990_17395 | Not Available | Negative | 4063343 - 4063564 | 8619.87 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

