Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 4027302 - 4027387 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4027394 - 4027469 | Not Available |
| pirin family protein | DW990_17285 | Not Available | Positive | 4027606 - 4028310 | 26544.4 |
| glycoside hydrolase family 2 protein | DW990_17295 | Not Available | Negative | 4030482 - 4033160 | 101238.0 |
| glycoside hydrolase | DW990_17300 | Not Available | Negative | 4033223 - 4035304 | 80569.0 |
| duf4982 domain-containing protein | DW990_17305 | Not Available | Negative | 4035301 - 4037748 | 92825.5 |
| susc/raga family tonb-linked outer membrane protein | DW990_17315 | Not Available | Negative | 4039401 - 4042754 | 124291.0 |
| fecr family protein | DW990_17320 | Not Available | Negative | 4042907 - 4043842 | 36575.9 |
| rna polymerase sigma-70 factor | DW990_17325 | Not Available | Negative | 4043897 - 4044487 | 23832.7 |
| Trna-met | Not Available | Not Available | Positive | 4044823 - 4044898 | Not Available |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

