Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marc family protein | DW990_17220 | Not Available | Negative | 4017364 - 4017966 | 22140.0 |
| crp/fnr family transcriptional regulator | DW990_17225 | Not Available | Positive | 4018153 - 4018830 | 25976.6 |
| duf4847 domain-containing protein | DW990_17235 | Not Available | Positive | 4021043 - 4021537 | 18544.7 |
| cmp deaminase | DW990_17240 | Not Available | Positive | 4021542 - 4021976 | 16211.4 |
| s41 family peptidase | DW990_17245 | Not Available | Positive | 4021991 - 4023739 | 64897.7 |
| 5-formyltetrahydrofolate cyclo-ligase | DW990_17250 | Not Available | Positive | 4023663 - 4024193 | 20447.6 |
| duf721 domain-containing protein | DW990_17255 | Not Available | Negative | 4024359 - 4024649 | 11221.9 |
| dna replication/repair protein recf | DW990_17260 | Not Available | Negative | 4024646 - 4025761 | 42967.7 |
| hypothetical protein | DW990_17265 | Not Available | Positive | 4025914 - 4026591 | 24504.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | DW990_17270 | Not Available | Positive | 4026684 - 4027190 | 18128.7 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

