Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DW990_17095 | Not Available | Positive | 3985346 - 3986164 | 30972.0 |
| gdp-mannose 4,6-dehydratase | DW990_17100 | Not Available | Positive | 3986247 - 3987326 | 40983.1 |
| mannose-1-phosphate guanylyltransferase | DW990_17110 | Not Available | Positive | 3988443 - 3989486 | 39376.4 |
| hypothetical protein | DW990_17115 | Not Available | Positive | 3989490 - 3989918 | 16939.3 |
| alpha-rhamnosidase | DW990_17120 | Not Available | Negative | 3990081 - 3992225 | 82024.8 |
| glycoside hydrolase family 127 protein | DW990_17130 | Not Available | Negative | 3994086 - 3996191 | 78760.8 |
| alpha-rhamnosidase | DW990_17135 | Not Available | Negative | 3996419 - 4000393 | 149782.0 |
| glycoside hydrolase family 88 protein | DW990_17145 | Not Available | Negative | 4002018 - 4003217 | 45387.1 |
| enolase | DW990_17155 | Not Available | Positive | 4005875 - 4007170 | 46741.8 |
| aaa family atpase | DW990_17160 | Not Available | Negative | 4007275 - 4008843 | 60578.0 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

