Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW990_01625 | Not Available | Positive | 399220 - 400860 | 61732.4 |
| glycoside hydrolase family 92 protein | DW990_01635 | Not Available | Positive | 401764 - 404097 | 88723.1 |
| glycoside hydrolase family 28 protein | DW990_01640 | Not Available | Positive | 404123 - 405535 | 52176.1 |
| histidine-type phosphatase | DW990_01650 | Not Available | Positive | 407823 - 409562 | 66793.8 |
| hybrid sensor histidine kinase/response regulator | DW990_01655 | Not Available | Negative | 409811 - 413851 | 153042.0 |
| hypothetical protein | DW990_01660 | Not Available | Positive | 414065 - 415564 | 56154.5 |
| beta-glycosidase | DW990_01675 | Not Available | Positive | 420416 - 422014 | 59495.4 |
| xylanase | DW990_01680 | Not Available | Positive | 422027 - 423592 | 59560.3 |
| laci family transcriptional regulator | DW990_01685 | Not Available | Negative | 423673 - 424695 | 38256.6 |
| alkyl hydroperoxide reductase subunit f | DW990_01690 | Not Available | Negative | 424835 - 426385 | 55984.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

