Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW990_17035 | Not Available | Negative | 3972591 - 3975863 | 120778.0 |
| alpha-l-fucosidase | DW990_17040 | Not Available | Negative | 3975912 - 3977396 | 57612.4 |
| glycosyltransferase | DW990_17050 | Not Available | Positive | 3978060 - 3979310 | 48088.3 |
| hypothetical protein | DW990_17055 | Not Available | Positive | 3979307 - 3979633 | 12548.5 |
| polysaccharide pyruvyl transferase family protein | DW990_17060 | Not Available | Positive | 3979669 - 3980364 | 26702.1 |
| 4fe-4s dicluster domain-containing protein | DW990_17065 | Not Available | Positive | 3980352 - 3981461 | 42797.2 |
| glycosyltransferase family 1 protein | DW990_17070 | Not Available | Positive | 3981484 - 3982596 | 43077.5 |
| hypothetical protein | DW990_17075 | Not Available | Positive | 3982581 - 3983261 | 26409.2 |
| glycosyltransferase | DW990_17080 | Not Available | Positive | 3983258 - 3983680 | 16095.5 |
| colanic acid biosynthesis acetyltransferase wcaf | DW990_17090 | Not Available | Positive | 3984778 - 3985332 | 20385.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

