Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate synthase | DW990_16975 | Not Available | Negative | 3956874 - 3957929 | 39848.0 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DW990_16980 | Not Available | Negative | 3958007 - 3958828 | 30339.4 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DW990_16985 | Not Available | Negative | 3958828 - 3960501 | 62975.0 |
| isochorismate synthase | DW990_16990 | Not Available | Negative | 3960528 - 3961670 | 43185.4 |
| hotdog fold thioesterase | DW990_16995 | Not Available | Negative | 3961667 - 3962074 | 14518.5 |
| pyridine nucleotide-disulfide oxidoreductase | DW990_17010 | Not Available | Positive | 3965680 - 3968181 | 90798.8 |
| marr family transcriptional regulator | DW990_17015 | Not Available | Positive | 3968215 - 3968544 | 12226.9 |
| clc family h(+)/cl(-) exchange transporter | DW990_17020 | Not Available | Positive | 3968577 - 3970175 | 59693.1 |
| diacylglucosamine hydrolase | DW990_17025 | Not Available | Positive | 3970185 - 3970775 | 22837.2 |
| susd family outer membrane lipoprotein nanu | DW990_17030 | Not Available | Negative | 3970987 - 3972561 | 59978.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

