Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW990_16810 | Not Available | Positive | 3917875 - 3918315 | 16227.5 |
| valine--trna ligase | DW990_16815 | Not Available | Negative | 3918496 - 3921123 | 99759.6 |
| nucleoside triphosphate pyrophosphohydrolase | DW990_16820 | Not Available | Positive | 3921231 - 3922019 | 30701.6 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_16825 | Not Available | Negative | 3922213 - 3923943 | 65704.7 |
| upxy family transcription antiterminator | DW990_16835 | Not Available | Positive | 3927510 - 3928160 | 24605.0 |
| hypothetical protein | DW990_16840 | Not Available | Positive | 3928178 - 3928612 | 16620.7 |
| polysaccharide export protein | DW990_16845 | Not Available | Positive | 3928638 - 3929438 | 29352.7 |
| tyrosine protein kinase | DW990_16850 | Not Available | Positive | 3929476 - 3931893 | 90152.0 |
| nucleotide sugar dehydrogenase | DW990_16855 | Not Available | Positive | 3931908 - 3933164 | 47490.7 |
| hypothetical protein | DW990_16865 | Not Available | Positive | 3934816 - 3936033 | 47579.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

