Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter periplasmic protein lptc | DW990_16755 | Not Available | Negative | 3904746 - 3905390 | 24876.2 |
| tetratricopeptide repeat protein | DW990_16760 | Not Available | Negative | 3905393 - 3906748 | 50268.8 |
| hypothetical protein | DW990_16765 | Not Available | Negative | 3906795 - 3908111 | 49216.0 |
| type iii pantothenate kinase | DW990_16770 | Not Available | Negative | 3908098 - 3908826 | 26911.9 |
| duf4105 domain-containing protein | DW990_16775 | Not Available | Positive | 3908953 - 3910128 | 45123.4 |
| alkaline phosphatase family protein | DW990_16780 | Not Available | Positive | 3910125 - 3911708 | 59447.8 |
| hypothetical protein | DW990_16790 | Not Available | Positive | 3915222 - 3916214 | 37676.2 |
| hypothetical protein | DW990_16795 | Not Available | Positive | 3916285 - 3916734 | 17049.0 |
| hypothetical protein | DW990_16800 | Not Available | Negative | 3916809 - 3917186 | 14902.8 |
| sigma-70 family rna polymerase sigma factor | DW990_16805 | Not Available | Negative | 3917183 - 3917728 | 21010.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

