Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW990_16630 | Not Available | Negative | 3875011 - 3875296 | 10421.3 |
| lema family protein | DW990_16635 | Not Available | Negative | 3875393 - 3875974 | 21752.9 |
| shikimate dehydrogenase | DW990_16650 | Not Available | Negative | 3877884 - 3878624 | 27732.7 |
| demethylmenaquinone methyltransferase | DW990_16655 | Not Available | Negative | 3878643 - 3879380 | 27936.8 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DW990_16660 | Not Available | Negative | 3879473 - 3880417 | 35960.1 |
| phoh family protein | DW990_16665 | Not Available | Negative | 3880438 - 3881442 | 37699.4 |
| hypothetical protein | DW990_16670 | Not Available | Positive | 3881600 - 3882274 | 24792.2 |
| trna pseudouridine(38-40) synthase trua | DW990_16675 | Not Available | Positive | 3882279 - 3883082 | 30885.8 |
| dna metabolism protein | DW990_16680 | Not Available | Negative | 3883048 - 3883815 | 30614.9 |
| tlpa family protein disulfide reductase | DW990_16690 | Not Available | Positive | 3885436 - 3886776 | 51223.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

