Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | DW990_16390 | Not Available | Negative | 3829451 - 3830761 | 48945.1 |
| hybrid sensor histidine kinase/response regulator | DW990_16395 | Not Available | Negative | 3830749 - 3833154 | 91205.4 |
| arac family transcriptional regulator | DW990_16400 | Not Available | Negative | 3833227 - 3834084 | 33511.1 |
| wg repeat-containing protein | DW990_16405 | Not Available | Negative | 3834062 - 3834412 | 13320.7 |
| hypothetical protein | DW990_16410 | Not Available | Positive | 3834667 - 3834948 | 10881.5 |
| hypothetical protein | DW990_16420 | Not Available | Negative | 3835220 - 3835636 | 15938.0 |
| hypothetical protein | DW990_16425 | Not Available | Negative | 3835650 - 3836477 | 32200.2 |
| hypothetical protein | DW990_16435 | Not Available | Positive | 3837172 - 3837393 | 8523.65 |
| duf4948 domain-containing protein | DW990_16440 | Not Available | Negative | 3837824 - 3838411 | 22131.1 |
| hypothetical protein | DW990_16450 | Not Available | Negative | 3839337 - 3839642 | 12018.6 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

