Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DW990_16265 | Not Available | Positive | 3804738 - 3805721 | 38267.5 |
| undecaprenyl-phosphate glucose phosphotransferase | DW990_16270 | Not Available | Positive | 3806152 - 3807555 | 54500.2 |
| polysaccharide export protein | DW990_16275 | Not Available | Positive | 3807605 - 3808396 | 28979.4 |
| n-acetylmuramoyl-l-alanine amidase | DW990_16285 | Not Available | Negative | 3810923 - 3811372 | 16949.3 |
| duf4248 domain-containing protein | DW990_16295 | Not Available | Positive | 3812189 - 3812419 | 8949.8 |
| duf3987 domain-containing protein | DW990_16300 | Not Available | Negative | 3812569 - 3814947 | 89946.2 |
| hypothetical protein | DW990_16305 | Not Available | Negative | 3815146 - 3815343 | 7987.94 |
| upxy family transcription antiterminator | DW990_16310 | Not Available | Positive | 3815621 - 3816121 | 18976.7 |
| nucleotidyltransferase domain-containing protein | DW990_16315 | Not Available | Positive | 3816189 - 3816479 | 10799.2 |
| hypothetical protein | DW990_16320 | Not Available | Positive | 3817007 - 3818524 | 56707.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

