Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | DW990_16130 | Not Available | Negative | 3756457 - 3757803 | 50760.7 |
| hypothetical protein | DW990_16145 | Not Available | Negative | 3762355 - 3762708 | 13603.3 |
| Trna-lys | Not Available | Not Available | Positive | 3762779 - 3762854 | Not Available |
| linear amide c-n hydrolase | DW990_16155 | Not Available | Negative | 3763026 - 3764105 | 39660.6 |
| sialate o-acetylesterase | DW990_16165 | Not Available | Negative | 3766562 - 3767986 | 53405.0 |
| dna-binding protein | DW990_16170 | Not Available | Negative | 3768004 - 3771234 | 121396.0 |
| glycoside hydrolase family 2 | DW990_16175 | Not Available | Negative | 3771382 - 3774222 | 106110.0 |
| duf4981 domain-containing protein | DW990_16180 | Not Available | Negative | 3774313 - 3777483 | 121067.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_16195 | Not Available | Negative | 3782423 - 3783856 | 53972.5 |
| tonb-dependent receptor | DW990_16200 | Not Available | Negative | 3783888 - 3787007 | 115328.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

