Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(37)-n1)-methyltransferase trmd | DW990_15900 | Not Available | Negative | 3706487 - 3707161 | 25423.7 |
| dna ligase (nad(+)) liga | DW990_15905 | Not Available | Positive | 3707260 - 3709257 | 75175.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DW990_15910 | Not Available | Positive | 3709359 - 3710252 | 32789.2 |
| Trna-arg | Not Available | Not Available | Positive | 3710616 - 3710692 | Not Available |
| patatin | DW990_15920 | Not Available | Negative | 3710782 - 3713091 | 87721.7 |
| molecular chaperone htpg | DW990_15925 | Not Available | Negative | 3713221 - 3715266 | 78183.2 |
| atp-dependent clp protease atp-binding subunit | DW990_15930 | Not Available | Negative | 3715401 - 3717917 | 93876.8 |
| dna gyrase subunit a | DW990_15935 | Not Available | Positive | 3718282 - 3720849 | 96421.0 |
| hypothetical protein | DW990_15940 | Not Available | Positive | 3720880 - 3722097 | 45948.8 |
| dna-binding protein | DW990_15950 | Not Available | Negative | 3723575 - 3723844 | 9982.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

