Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleotide-diphosphate reductase subunit beta | DW990_15790 | Not Available | Negative | 3675960 - 3677009 | 41348.8 |
| ribonucleoside-diphosphate reductase subunit alpha | DW990_15795 | Not Available | Negative | 3677172 - 3679691 | 95735.6 |
| heme-binding protein | DW990_15805 | Not Available | Negative | 3680258 - 3681454 | 45080.6 |
| tonb-dependent receptor | DW990_15810 | Not Available | Negative | 3681488 - 3683548 | 78316.4 |
| tonb-dependent receptor | DW990_15815 | Not Available | Negative | 3683920 - 3686097 | 81301.7 |
| putative transporter | DW990_15820 | Not Available | Negative | 3686488 - 3688176 | 60780.7 |
| cobyrinate a,c-diamide synthase | DW990_15825 | Not Available | Positive | 3688412 - 3689740 | 49093.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DW990_15830 | Not Available | Positive | 3689737 - 3690312 | 22159.8 |
| cobyric acid synthase | DW990_15835 | Not Available | Positive | 3690312 - 3691802 | 55408.7 |
| pyridoxal phosphate-dependent class ii aminotransferase | DW990_15840 | Not Available | Positive | 3691795 - 3692805 | 38761.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

