Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1896 domain-containing protein | DW990_15550 | Not Available | Positive | 3614397 - 3614984 | 22268.0 |
| tetracycline resistance ribosomal protection protein tet(q) | DW990_15560 | Not Available | Positive | 3621447 - 3623372 | 72226.1 |
| hybrid sensor histidine kinase/response regulator | DW990_15565 | Not Available | Positive | 3623372 - 3625690 | 87108.3 |
| sigma-54-dependent fis family transcriptional regulator | DW990_15570 | Not Available | Positive | 3625683 - 3627005 | 49691.2 |
| deaminase | DW990_15575 | Not Available | Positive | 3627285 - 3627707 | 16091.5 |
| rtec protein | DW990_15580 | Not Available | Positive | 3627946 - 3628551 | 23243.2 |
| atp-binding protein | DW990_15585 | Not Available | Positive | 3628853 - 3629983 | 43083.9 |
| ntpase | DW990_15590 | Not Available | Positive | 3630000 - 3633254 | 124234.0 |
| conjugal transfer protein trag | DW990_15595 | Not Available | Negative | 3633386 - 3635404 | 77162.4 |
| relaxase | DW990_15600 | Not Available | Negative | 3635435 - 3636682 | 46565.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

