Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | DW990_15385 | Not Available | Negative | 3577448 - 3578524 | 39168.8 |
| crispr-associated endonuclease cas2 | DW990_15390 | Not Available | Negative | 3579138 - 3579428 | 10996.3 |
| type i-c crispr-associated endonuclease cas1 | DW990_15395 | Not Available | Negative | 3579438 - 3580460 | 38724.4 |
| crispr-associated protein cas4 | DW990_15400 | Not Available | Negative | 3580457 - 3581122 | 25827.0 |
| type i-c crispr-associated protein cas7/csd2 | DW990_15405 | Not Available | Negative | 3581132 - 3581983 | 31367.5 |
| type i-c crispr-associated protein cas8c/csd1 | DW990_15410 | Not Available | Negative | 3582005 - 3583726 | 65452.8 |
| type i-c crispr-associated protein cas5 | DW990_15415 | Not Available | Negative | 3583723 - 3584403 | 26815.2 |
| hypothetical protein | DW990_15420 | Not Available | Negative | 3584405 - 3585265 | 33191.4 |
| crispr-associated helicase cas3' | DW990_15425 | Not Available | Negative | 3585276 - 3587501 | 84292.8 |
| histidine--trna ligase | DW990_15430 | Not Available | Negative | 3587903 - 3589267 | 50269.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

