Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4450 domain-containing protein | DW990_14985 | Not Available | Positive | 3497375 - 3498073 | 26049.4 |
| hypothetical protein | DW990_14990 | Not Available | Positive | 3498070 - 3498873 | 30918.3 |
| glycoside hydrolase family 28 protein | DW990_14995 | Not Available | Positive | 3498889 - 3500313 | 52096.8 |
| glycosyl hydrolase family 2 | DW990_15000 | Not Available | Positive | 3500330 - 3503092 | 104144.0 |
| hypothetical protein | DW990_15005 | Not Available | Negative | 3503446 - 3503568 | 4281.98 |
| isoaspartyl peptidase/l-asparaginase | DW990_15010 | Not Available | Negative | 3504043 - 3505029 | 34958.3 |
| l-rhamnose mutarotase | DW990_15015 | Not Available | Negative | 3505737 - 3506126 | 15271.5 |
| rok family protein | DW990_15020 | Not Available | Negative | 3506126 - 3507097 | 34285.3 |
| abc transporter atp-binding protein | DW990_15025 | Not Available | Positive | 3507250 - 3507969 | 26742.3 |
| abc transporter permease | DW990_15030 | Not Available | Positive | 3507979 - 3509235 | 46624.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

