Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DW990_14915 | Not Available | Negative | 3469231 - 3472080 | 106679.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_14920 | Not Available | Negative | 3472121 - 3474097 | 74961.2 |
| tonb-dependent receptor | DW990_14925 | Not Available | Negative | 3474116 - 3477298 | 118488.0 |
| tonb-dependent receptor | DW990_14935 | Not Available | Positive | 3479134 - 3482274 | 115591.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_14940 | Not Available | Positive | 3482304 - 3484400 | 78398.8 |
| duf3791 domain-containing protein | DW990_14945 | Not Available | Negative | 3484517 - 3484726 | 8236.12 |
| glycoside hydrolase family 88 protein | DW990_14955 | Not Available | Positive | 3485826 - 3486959 | 43912.1 |
| beta-galactosidase | DW990_14960 | Not Available | Negative | 3487078 - 3489192 | 81020.3 |
| rhamnogalacturonan acetylesterase | DW990_14975 | Not Available | Positive | 3494621 - 3495895 | 47778.3 |
| glycoside hydrolase family 28 protein | DW990_14980 | Not Available | Positive | 3495913 - 3497397 | 54937.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

