Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isas1 family transposase | DW990_14845 | Not Available | Negative | 3445536 - 3445990 | 17218.0 |
| hypothetical protein | DW990_14850 | Not Available | Negative | 3446523 - 3446807 | 10713.4 |
| rhamnogalacturonan acetylesterase | DW990_14865 | Not Available | Negative | 3452071 - 3453627 | 57982.5 |
| duf4982 domain-containing protein | DW990_14870 | Not Available | Negative | 3453866 - 3456871 | 114613.0 |
| glycoside hydrolase family 2 protein | DW990_14875 | Not Available | Negative | 3457077 - 3459932 | 106489.0 |
| duf4976 domain-containing protein | DW990_14880 | Not Available | Negative | 3459946 - 3461340 | 51585.2 |
| oligogalacturonide lyase | DW990_14885 | Not Available | Negative | 3461354 - 3462679 | 49976.5 |
| hypothetical protein | DW990_14890 | Not Available | Negative | 3463632 - 3464300 | 24703.0 |
| duf1565 domain-containing protein | DW990_14895 | Not Available | Negative | 3464297 - 3465850 | 57217.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_14910 | Not Available | Negative | 3467505 - 3469202 | 64090.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

