Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | DW990_14785 | Not Available | Positive | 3422648 - 3423667 | 38281.6 |
| tolc family protein | DW990_14800 | Not Available | Positive | 3427880 - 3429199 | 50562.7 |
| amino acid permease | DW990_14805 | Not Available | Positive | 3429288 - 3430946 | 59786.5 |
| alpha-n-acetylglucosaminidase | DW990_14810 | Not Available | Negative | 3431119 - 3433275 | 82808.5 |
| fumarate hydratase | DW990_14815 | Not Available | Negative | 3433378 - 3435021 | 60487.7 |
| coce/nond family hydrolase | DW990_14820 | Not Available | Positive | 3435160 - 3437067 | 73912.9 |
| duf4954 family protein | DW990_14825 | Not Available | Negative | 3437215 - 3439200 | 74479.4 |
| gtpase hflx | DW990_14830 | Not Available | Negative | 3439214 - 3440467 | 47657.6 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_14835 | Not Available | Negative | 3440559 - 3442145 | 58752.5 |
| tonb-dependent receptor | DW990_14840 | Not Available | Negative | 3442169 - 3445189 | 111872.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

