Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | DW990_14725 | Not Available | Positive | 3406550 - 3406906 | 13937.7 |
| biotin--[acetyl-coa-carboxylase] ligase | DW990_14730 | Not Available | Positive | 3406890 - 3407657 | 29255.9 |
| peptidase s41 | DW990_14735 | Not Available | Negative | 3407654 - 3409093 | 54094.4 |
| mate family efflux transporter | DW990_14740 | Not Available | Positive | 3409252 - 3410577 | 49012.8 |
| ump kinase | DW990_14745 | Not Available | Positive | 3410616 - 3411326 | 25575.2 |
| glycoside hydrolase family 88 protein | DW990_14750 | Not Available | Positive | 3411577 - 3412815 | 47154.2 |
| hypothetical protein | DW990_14755 | Not Available | Positive | 3412870 - 3414978 | 79950.2 |
| histidine phosphatase family protein | DW990_14765 | Not Available | Negative | 3418282 - 3418800 | 19418.4 |
| ribosome-recycling factor | DW990_14775 | Not Available | Positive | 3421021 - 3421581 | 20738.2 |
| ribosome small subunit-dependent gtpase a | DW990_14780 | Not Available | Positive | 3421702 - 3422634 | 35098.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

