Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DW990_14295 | Not Available | Negative | 3311062 - 3311826 | 28911.9 |
| abc transporter permease | DW990_14300 | Not Available | Negative | 3311823 - 3312566 | 27369.4 |
| lps export abc transporter atp-binding protein | DW990_14305 | Not Available | Positive | 3312695 - 3313516 | 31018.3 |
| rna-binding protein | DW990_14310 | Not Available | Negative | 3313591 - 3313836 | 9049.81 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | DW990_14320 | Not Available | Positive | 3315753 - 3316424 | 24864.8 |
| atp-dependent clp protease atp-binding subunit clpx | DW990_14325 | Not Available | Positive | 3316548 - 3317798 | 46679.9 |
| dna helicase recq | DW990_14330 | Not Available | Positive | 3317956 - 3320136 | 81679.6 |
| duf3244 domain-containing protein | DW990_14340 | Not Available | Positive | 3322224 - 3322658 | 16352.8 |
| abc transporter permease | DW990_14345 | Not Available | Positive | 3322662 - 3323639 | 37072.4 |
| efflux rnd transporter periplasmic adaptor subunit | DW990_14350 | Not Available | Positive | 3323900 - 3324973 | 39523.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

