Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | DW990_14055 | Not Available | Negative | 3256776 - 3256973 | 7367.31 |
| translation initiation factor if-3 | DW990_14060 | Not Available | Negative | 3257045 - 3257641 | 22643.4 |
| peptide deformylase | DW990_14075 | Not Available | Negative | 3261857 - 3262411 | 21050.7 |
| holliday junction resolvase ruvx | DW990_14080 | Not Available | Negative | 3262435 - 3262854 | 15845.4 |
| hypothetical protein | DW990_14085 | Not Available | Positive | 3263061 - 3264299 | 47660.4 |
| duf3869 domain-containing protein | DW990_14090 | Not Available | Positive | 3264310 - 3265152 | 30349.3 |
| ompa family protein | DW990_14095 | Not Available | Positive | 3265196 - 3266290 | 39293.2 |
| glycoside hydrolase xylanase | DW990_14100 | Not Available | Negative | 3266622 - 3267581 | 35488.6 |
| ytxh domain-containing protein | DW990_14110 | Not Available | Positive | 3268414 - 3268611 | 6773.24 |
| phage holin family protein | DW990_14115 | Not Available | Positive | 3268689 - 3269045 | 13343.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

