Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | DW990_13930 | Not Available | Negative | 3233437 - 3234264 | 30709.1 |
| phenylalanine--trna ligase subunit beta | DW990_13940 | Not Available | Positive | 3236235 - 3238697 | 91165.9 |
| yebc/pmpr family dna-binding transcriptional regulator | DW990_13945 | Not Available | Positive | 3238731 - 3239471 | 27834.7 |
| tigr03905 family tscpd domain-containing protein | DW990_13950 | Not Available | Positive | 3239473 - 3239718 | 9080.04 |
| hypothetical protein | DW990_13955 | Not Available | Negative | 3239834 - 3240961 | 42336.1 |
| hepn domain-containing protein | DW990_13965 | Not Available | Negative | 3242610 - 3243014 | 15372.7 |
| nucleotidyltransferase domain-containing protein | DW990_13970 | Not Available | Negative | 3243005 - 3243325 | 12470.8 |
| hypothetical protein | DW990_13980 | Not Available | Negative | 3243728 - 3244018 | 11782.2 |
| hypothetical protein | DW990_13985 | Not Available | Negative | 3244012 - 3244386 | 14291.3 |
| hypothetical protein | DW990_13990 | Not Available | Negative | 3244533 - 3244952 | 16269.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

