Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s41 family peptidase | DW990_13690 | Not Available | Positive | 3169158 - 3170759 | 60811.7 |
| phosphatase pap2 family protein | DW990_13695 | Not Available | Negative | 3170863 - 3171474 | 22003.9 |
| succinate dehydrogenase/fumarate reductase cytochrome b subunit | DW990_13700 | Not Available | Positive | 3171665 - 3172351 | 25487.5 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DW990_13705 | Not Available | Positive | 3172386 - 3174344 | 72651.5 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DW990_13710 | Not Available | Positive | 3174365 - 3175120 | 27308.1 |
| arac family transcriptional regulator | DW990_13715 | Not Available | Negative | 3175185 - 3176045 | 33227.9 |
| fimbrillin family protein | DW990_13720 | Not Available | Negative | 3176543 - 3177526 | 35284.9 |
| duf5119 domain-containing protein | DW990_13725 | Not Available | Negative | 3177575 - 3178570 | 36240.8 |
| glycoside hydrolase family 29 | DW990_13740 | Not Available | Positive | 3180498 - 3182381 | 70615.9 |
| dna-protecting protein dpra | DW990_13745 | Not Available | Negative | 3182462 - 3183577 | 40918.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

