Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | DW990_12965 | Not Available | Positive | 3052904 - 3054142 | 47362.2 |
| class i sam-dependent rrna methyltransferase | DW990_12975 | Not Available | Negative | 3055638 - 3056822 | 44449.1 |
| 3'-5' exonuclease domain-containing protein 2 | DW990_12980 | Not Available | Negative | 3056812 - 3057462 | 24593.4 |
| duf5063 domain-containing protein | DW990_12985 | Not Available | Negative | 3057459 - 3058022 | 21633.7 |
| dna translocase ftsk | DW990_12990 | Not Available | Positive | 3058127 - 3060592 | 91870.1 |
| hypothetical protein | DW990_12995 | Not Available | Positive | 3060609 - 3061223 | 22975.4 |
| thioredoxin-disulfide reductase | DW990_13000 | Not Available | Positive | 3061293 - 3062240 | 34005.6 |
| abc transporter atp-binding protein | DW990_13015 | Not Available | Positive | 3066597 - 3067304 | 26403.7 |
| 50s ribosomal protein l21 | DW990_13030 | Not Available | Positive | 3070150 - 3070467 | 11743.4 |
| 50s ribosomal protein l27 | DW990_13035 | Not Available | Positive | 3070489 - 3070752 | 9251.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

