Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW990_12630 | Not Available | Positive | 2973960 - 2974259 | 11054.1 |
| cpbp family intramembrane metalloprotease | DW990_12635 | Not Available | Positive | 2974432 - 2975262 | 30257.8 |
| duf2975 domain-containing protein | DW990_12640 | Not Available | Positive | 2975271 - 2975918 | 23980.7 |
| duf2975 domain-containing protein | DW990_12645 | Not Available | Positive | 2975935 - 2976582 | 24199.5 |
| hypothetical protein | DW990_12650 | Not Available | Positive | 2976593 - 2976850 | 10168.7 |
| transcriptional regulator | DW990_12655 | Not Available | Positive | 2976854 - 2977066 | 7789.65 |
| tigr00341 family protein | DW990_12670 | Not Available | Negative | 2981652 - 2983016 | 50535.2 |
| lipopolysaccharide biosynthesis protein | DW990_12675 | Not Available | Negative | 2983019 - 2984464 | 54344.9 |
| site-specific integrase | DW990_12685 | Not Available | Positive | 2985622 - 2986740 | 43299.0 |
| hypothetical protein | DW990_12695 | Not Available | Positive | 2987142 - 2990270 | 117096.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

