Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM51-1
Accession NumberQSEC00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad/nadp octopine/nopaline dehydrogenase | DW990_00050 | Not Available | + | 12099 - 13199 | 41185.1 |
| licd family protein | DW990_00055 | Not Available | + | 13203 - 14000 | 31802.5 |
| hemolysin activation protein | DW990_00060 | Not Available | + | 14014 - 15030 | 40425.5 |
| glycosyltransferase | DW990_00065 | Not Available | + | 15003 - 16118 | 42944.4 |
| glycosyltransferase | DW990_00070 | Not Available | + | 16131 - 17393 | 47697.5 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | DW990_00085 | Not Available | + | 20733 - 21428 | 25598.6 |
| s-ribosylhomocysteine lyase | DW990_00090 | Not Available | + | 21440 - 21925 | 18457.2 |
| 30s ribosomal protein s15 | DW990_00095 | Not Available | - | 22028 - 22297 | 10364.5 |
| hypothetical protein | DW990_00100 | Not Available | - | 22578 - 22877 | 12076.5 |
| hypothetical protein | DW990_00105 | Not Available | - | 22889 - 23134 | 9361.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
