Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW990_11760 | Not Available | Negative | 2821912 - 2823834 | 73144.0 |
| susc/raga family tonb-linked outer membrane protein | DW990_11765 | Not Available | Negative | 2823856 - 2827404 | 132357.0 |
| fecr family protein | DW990_11770 | Not Available | Negative | 2827447 - 2828457 | 38678.5 |
| rna polymerase sigma-70 factor | DW990_11775 | Not Available | Negative | 2828546 - 2829133 | 22777.2 |
| leucine--trna ligase | DW990_11785 | Not Available | Positive | 2832834 - 2835668 | 108292.0 |
| yitt family protein | DW990_11790 | Not Available | Positive | 2835761 - 2836645 | 32894.0 |
| n-acetyltransferase | DW990_11795 | Not Available | Negative | 2836744 - 2837271 | 20733.7 |
| quinolinate synthase nada | DW990_11805 | Not Available | Negative | 2838266 - 2839258 | 36624.0 |
| energy transducer tonb | DW990_11825 | Not Available | Positive | 2844508 - 2845932 | 54399.8 |
| serpin family protein | DW990_11830 | Not Available | Positive | 2846019 - 2847260 | 46530.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

