Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | DW990_11250 | Not Available | Negative | 2717383 - 2718189 | 31256.6 |
| diaminopimelate dehydrogenase | DW990_11255 | Not Available | Negative | 2718296 - 2719195 | 32291.9 |
| hypothetical protein | DW990_11265 | Not Available | Negative | 2720051 - 2720875 | 30836.1 |
| hemolysin iii | DW990_11275 | Not Available | Positive | 2722399 - 2723034 | 23650.2 |
| anaerobic ribonucleoside triphosphate reductase | DW990_11280 | Not Available | Positive | 2723328 - 2725604 | 86317.2 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | DW990_11285 | Not Available | Positive | 2725610 - 2726068 | 17410.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DW990_11295 | Not Available | Negative | 2728041 - 2729189 | 42380.3 |
| m23 family peptidase | DW990_11300 | Not Available | Negative | 2729197 - 2730054 | 32093.4 |
| 16s rrna processing protein rimm | DW990_11305 | Not Available | Negative | 2730073 - 2730591 | 19831.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DW990_11310 | Not Available | Negative | 2730603 - 2731907 | 47616.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

