Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DW990_11070 | Not Available | Negative | 2677816 - 2678535 | 26636.3 |
| imidazole glycerol phosphate synthase subunit hish | DW990_11075 | Not Available | Negative | 2678577 - 2679167 | 22269.8 |
| Trna-asp | Not Available | Not Available | Positive | 2680287 - 2680364 | Not Available |
| hypothetical protein | DW990_11090 | Not Available | Positive | 2680409 - 2680612 | 7893.35 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | DW990_11095 | Not Available | Positive | 2680934 - 2682109 | 43976.3 |
| port family protein | DW990_11100 | Not Available | Negative | 2682211 - 2682882 | 24189.6 |
| port family protein | DW990_11105 | Not Available | Negative | 2683029 - 2683634 | 21310.4 |
| porin family protein | DW990_11110 | Not Available | Negative | 2683838 - 2684374 | 19608.1 |
| m23 family peptidase | DW990_11120 | Not Available | Negative | 2684773 - 2685396 | 22827.6 |
| hypothetical protein | DW990_11125 | Not Available | Negative | 2685406 - 2686065 | 24450.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

