Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | DW990_00945 | Not Available | Positive | 269081 - 273067 | 150507.0 |
| rubrerythrin family protein | DW990_00950 | Not Available | Negative | 273161 - 273739 | 21626.4 |
| duf4884 domain-containing protein | DW990_00955 | Not Available | Positive | 273920 - 274189 | 10182.1 |
| stas domain-containing protein | DW990_00960 | Not Available | Positive | 274288 - 275970 | 60560.7 |
| hypothetical protein | DW990_00965 | Not Available | Positive | 276279 - 276638 | 13863.6 |
| atp-binding protein | DW990_00980 | Not Available | Positive | 277514 - 278551 | 39273.2 |
| hypothetical protein | DW990_00990 | Not Available | Positive | 279218 - 279445 | 8854.14 |
| pseudohemocyanin | DW990_00995 | Not Available | Positive | 279415 - 280395 | 38302.3 |
| tetr/acrr family transcriptional regulator | DW990_01000 | Not Available | Positive | 280899 - 281522 | 23993.1 |
| stld/darb family beta-ketosynthase | DW990_01005 | Not Available | Positive | 281527 - 282666 | 42556.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

