Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | DW990_10185 | Not Available | Positive | 2463873 - 2465048 | 44742.1 |
| ai-2e family transporter | DW990_10190 | Not Available | Negative | 2465049 - 2466050 | 36957.9 |
| hypothetical protein | DW990_10195 | Not Available | Negative | 2466110 - 2467060 | 35693.6 |
| o-glcnacase | DW990_10200 | Not Available | Negative | 2467075 - 2469288 | 84957.3 |
| recq family atp-dependent dna helicase | DW990_10205 | Not Available | Negative | 2469335 - 2471230 | 72894.9 |
| single-stranded-dna-specific exonuclease recj | DW990_10210 | Not Available | Negative | 2471348 - 2473120 | 66577.5 |
| aminopeptidase | DW990_10215 | Not Available | Negative | 2473234 - 2474445 | 45970.4 |
| patatin family protein | DW990_10225 | Not Available | Positive | 2476193 - 2477047 | 32964.4 |
| hypothetical protein | DW990_10230 | Not Available | Negative | 2477187 - 2477987 | 30042.9 |
| ribonuclease y | DW990_10235 | Not Available | Negative | 2478180 - 2479715 | 57327.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

