Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DW990_10010 | Not Available | Positive | 2419651 - 2420910 | 45795.5 |
| acrb/acrd/acrf family protein | DW990_10015 | Not Available | Positive | 2420922 - 2424005 | 112452.0 |
| tolc family protein | DW990_10020 | Not Available | Positive | 2424016 - 2425185 | 43862.6 |
| nitroreductase family protein | DW990_10030 | Not Available | Positive | 2426042 - 2426770 | 27884.3 |
| gfo/idh/moca family oxidoreductase | DW990_10040 | Not Available | Negative | 2427138 - 2428700 | 58101.8 |
| homoserine o-succinyltransferase | DW990_10045 | Not Available | Positive | 2429083 - 2430000 | 35691.8 |
| collagenase-like protease | DW990_10050 | Not Available | Positive | 2429997 - 2431826 | 69884.0 |
| zinc ribbon domain-containing protein | DW990_10055 | Not Available | Positive | 2431813 - 2432775 | 36768.0 |
| tonb-dependent receptor | DW990_10060 | Not Available | Negative | 2433016 - 2435442 | 92201.1 |
| luxr family transcriptional regulator | DW990_10065 | Not Available | Negative | 2435612 - 2436232 | 23357.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

