Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | DW990_09410 | Not Available | Positive | 2279135 - 2280451 | 49038.9 |
| capsule biosynthesis protein | DW990_09415 | Not Available | Positive | 2280691 - 2283183 | 92268.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DW990_09425 | Not Available | Negative | 2284506 - 2285075 | 21796.7 |
| glucose-1-phosphate thymidylyltransferase | DW990_09430 | Not Available | Negative | 2285075 - 2285962 | 32737.7 |
| mannose-1-phosphate guanylyltransferase | DW990_09440 | Not Available | Positive | 2287514 - 2288578 | 40506.4 |
| gdp-mannose 4,6-dehydratase | DW990_09445 | Not Available | Positive | 2288754 - 2289836 | 41218.5 |
| gdp-l-fucose synthase | DW990_09450 | Not Available | Positive | 2289836 - 2290912 | 40525.7 |
| thiol peroxidase | DW990_09455 | Not Available | Negative | 2291107 - 2291610 | 17960.7 |
| multidrug transporter | DW990_09465 | Not Available | Negative | 2292312 - 2293829 | 58889.6 |
| glutamine--trna ligase/yqey domain fusion protein | DW990_09470 | Not Available | Negative | 2293840 - 2295579 | 66876.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

