Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DW990_00840 | Not Available | Positive | 227453 - 229180 | 67951.9 |
| duf1593 domain-containing protein | DW990_00845 | Not Available | Negative | 229229 - 230584 | 51263.6 |
| pectate lyase | DW990_00850 | Not Available | Negative | 230601 - 232742 | 81684.3 |
| hypothetical protein | DW990_00855 | Not Available | Positive | 232726 - 232980 | 10260.6 |
| hypothetical protein | DW990_00860 | Not Available | Negative | 233011 - 235323 | 86455.1 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_00865 | Not Available | Negative | 235343 - 237382 | 76726.5 |
| tonb-dependent receptor | DW990_00870 | Not Available | Negative | 237395 - 240730 | 122693.0 |
| s9 family peptidase | DW990_00875 | Not Available | Negative | 241260 - 243503 | 85720.9 |
| glycoside hydrolase family 127 protein | DW990_00880 | Not Available | Negative | 243515 - 245920 | 89576.9 |
| glycoside hydrolase | DW990_00885 | Not Available | Negative | 245990 - 248392 | 90174.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

