Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | DW990_09175 | Not Available | Positive | 2224962 - 2226845 | 71355.9 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit | DW990_09180 | Not Available | Positive | 2226871 - 2227947 | 39939.5 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DW990_09185 | Not Available | Positive | 2227971 - 2231198 | 119763.0 |
| response regulator | DW990_09190 | Not Available | Positive | 2231366 - 2233711 | 89734.7 |
| hsp20/alpha crystallin family protein | DW990_09195 | Not Available | Negative | 2233952 - 2234395 | 16943.0 |
| hypothetical protein | DW990_09200 | Not Available | Negative | 2234660 - 2235118 | 17636.3 |
| linear amide c-n hydrolase | DW990_09205 | Not Available | Negative | 2235353 - 2236411 | 39401.4 |
| hypothetical protein | DW990_09210 | Not Available | Negative | 2236570 - 2236809 | 9399.8 |
| hpaii family restriction endonuclease | DW990_09215 | Not Available | Positive | 2236912 - 2238000 | 41342.9 |
| alpha-amylase | DW990_09220 | Not Available | Negative | 2238128 - 2239825 | 64713.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

