Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase small subunit | DW990_09030 | Not Available | Negative | 2180794 - 2182704 | 70522.5 |
| abc transporter atp-binding protein | DW990_09040 | Not Available | Positive | 2184774 - 2186408 | 61961.7 |
| rna polymerase sigma-70 factor | DW990_09045 | Not Available | Positive | 2186448 - 2187029 | 22694.6 |
| duf4974 domain-containing protein | DW990_09050 | Not Available | Positive | 2187158 - 2188144 | 38650.5 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_09060 | Not Available | Positive | 2191723 - 2193258 | 58902.3 |
| duf4981 domain-containing protein | DW990_09070 | Not Available | Positive | 2195413 - 2198643 | 122554.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_09075 | Not Available | Negative | 2198830 - 2200647 | 68259.8 |
| hypothetical protein | DW990_09085 | Not Available | Positive | 2203916 - 2204118 | 7277.04 |
| Trna-thr | Not Available | Not Available | Positive | 2204480 - 2204555 | Not Available |
| carboxypeptidase regulatory-like domain-containing protein | DW990_09095 | Not Available | Negative | 2204580 - 2205404 | 31911.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

