Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DW990_08895 | Not Available | Positive | 2147662 - 2148156 | 19238.1 |
| atp-dependent 6-phosphofructokinase | DW990_08900 | Not Available | Positive | 2148222 - 2149205 | 35513.5 |
| alpha-glucan family phosphorylase | DW990_08910 | Not Available | Positive | 2151484 - 2154042 | 98124.5 |
| arginase family protein | DW990_08915 | Not Available | Positive | 2154059 - 2154868 | 30785.6 |
| methylglyoxal synthase | DW990_08920 | Not Available | Positive | 2154923 - 2155459 | 20470.6 |
| dna-binding protein | DW990_08930 | Not Available | Positive | 2156272 - 2156493 | 8591.42 |
| hypothetical protein | DW990_08935 | Not Available | Positive | 2156718 - 2157089 | 14334.6 |
| is5 family transposase | DW990_08940 | Not Available | Positive | 2157043 - 2157507 | 17649.1 |
| dna-binding protein | DW990_08945 | Not Available | Positive | 2157516 - 2157827 | 11696.0 |
| hypothetical protein | DW990_08950 | Not Available | Negative | 2158007 - 2158186 | 6420.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

