Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DW990_08765 | Not Available | Positive | 2124533 - 2125483 | 36132.2 |
| hypothetical protein | DW990_08770 | Not Available | Positive | 2125513 - 2126274 | 29186.2 |
| integrase | DW990_08775 | Not Available | Positive | 2126282 - 2127208 | 35871.6 |
| lactonase family protein | DW990_08785 | Not Available | Positive | 2128476 - 2129630 | 42627.1 |
| carboxymuconolactone decarboxylase | DW990_08790 | Not Available | Positive | 2129655 - 2131262 | 59895.7 |
| hypothetical protein | DW990_08795 | Not Available | Negative | 2131476 - 2131715 | 9121.88 |
| susc/raga family tonb-linked outer membrane protein | DW990_08800 | Not Available | Positive | 2132431 - 2135142 | 99198.8 |
| alpha/beta fold hydrolase | DW990_08825 | Not Available | Positive | 2139089 - 2140120 | 39251.8 |
| flavodoxin | DW990_08830 | Not Available | Positive | 2140280 - 2140702 | 15689.8 |
| integrase | DW990_08835 | Not Available | Negative | 2140788 - 2141018 | 8991.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

