Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [fefe] hydrogenase h-cluster maturation gtpase hydf | DW990_08520 | Not Available | Negative | 2083736 - 2084926 | 43910.6 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | DW990_08525 | Not Available | Negative | 2084990 - 2086408 | 53347.0 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | DW990_08530 | Not Available | Negative | 2086421 - 2087455 | 38858.7 |
| 4fe-4s dicluster domain-containing protein | DW990_08535 | Not Available | Negative | 2087464 - 2088930 | 54239.4 |
| co-chaperone groes | DW990_08540 | Not Available | Positive | 2089311 - 2089583 | 9740.92 |
| Trna-thr | Not Available | Not Available | Positive | 2091508 - 2091581 | Not Available |
| mate family efflux transporter | DW990_08555 | Not Available | Positive | 2091734 - 2093086 | 49552.6 |
| crp/fnr family transcriptional regulator | DW990_08560 | Not Available | Positive | 2093122 - 2093706 | 22223.6 |
| carbonic anhydrase | DW990_08565 | Not Available | Positive | 2093897 - 2094436 | 19937.5 |
| gfo/idh/moca family oxidoreductase | DW990_08570 | Not Available | Negative | 2094560 - 2095975 | 53508.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

